Wonder!

biology, medicine, network, complex system, anything that can be called Wonderful!

Commonly Used Force Fields

  • MM2, MM3 and MM4(N. L. Allingeret al.)
    small organic molecules
    http://europa.chem.uga.edu/index.html
  • MMFF(Merck Molecular Force Field, proposed by T. A. Halgren)
    biomolecules
    T.A. Halgren, J. Comput. Chem. 17, 490 (1996)
  • AMBER(Assisted Model Building with Energy Refinement, by P. A.
    Kollmanet al.)
    biomolecules
    http://www.amber.ucsf.edu/amber/amber.html
  • Optimized Potentials for Liquid Simulation, W. L. Jorgensen et al)
    organic liquids
    W. Damm, A. Frontera, J. Tirado-Rives, W.L. Jorgensen, J. Comput.Chem. 18, 1955 (1997);
  • CHARMM(Chemistry at HARvardMacromolecular Mechanics, by M.Karplusand coworkers)
    biomolecules
    http://www.charmm.org/
  • ECEPP(Empirical Conformational Energy Program for Peptides, by H. A. Scheragaet al.)
    biomolecules
    http://www.tc.cornell.edu/Research/Biomed/CompBiologyTools/eceppak/
    http://www.chem.cornell.edu/has5/
  • GROMOS(GROningenMOlecularSimulation, by W. F. van Gunsterenand coworkers)
    biomolecules
    http://www.igc.ethz.ch/gromos/

2 Comments:

Anonymous Anonymous said...

Nice! Where you get this guestbook? I want the same script.. Awesome content. thankyou.
»

6/26/2006 8:40 PM  
Anonymous Anonymous said...

This site is one of the best I have ever seen, wish I had one like this.
»

7/17/2006 6:53 PM  

Post a Comment

<< Home